@> 2016 atoms and 34 coordinate set(s) were parsed in 0.46s.
@> 2016 atoms and 1 coordinate set(s) were parsed in 0.04s.
Visualizations and results¶
Original Structure Visualization¶
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@> 2016 atoms and 34 coordinate set(s) were parsed in 0.45s.
@> 2016 atoms and 1 coordinate set(s) were parsed in 0.05s.
2n0aD_TEMP Blue:2kkwA Red:2n0aD
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AlphaFold predictions¶
Best AF prediction to fold 1¶
@> 1012 atoms and 1 coordinate set(s) were parsed in 0.03s.
@> 2016 atoms and 34 coordinate set(s) were parsed in 0.48s.
Blue:ShallowMsa_008_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 Red:2kkwA
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Best AF prediction to fold 2¶
@> 1012 atoms and 1 coordinate set(s) were parsed in 0.03s.
@> 2016 atoms and 1 coordinate set(s) were parsed in 0.06s.
Blue:ShallowMsa_015_unrelaxed_rank_002_alphafold2_ptm_model_1_seed_000 Red:2n0aD
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EsmFold Prediction¶
Best EsmFold prediction to fold 1¶
single positional indexer is out-of-bounds name 'max_esm_pdb1' is not defined
Best EsmFold prediction to fold 2¶
single positional indexer is out-of-bounds name 'max_esm_pdb2' is not defined
Contact maps Msa Transformers¶
No max_f1Score_pdb1 No max_f1Score_pdb2 No max_precision_pdb1 No max_precision_pdb2 No max_recall_pdb1 No max_recall_pdb2
No max_f1Score_pdb1 No max_f1Score_pdb2 No cmap_pred_precision_1 No cmap_pred_precision_2 No cmap_pred_recall_1 No cmap_pred_recall_2
No plot for f1Score_1 No plot for f1Score_2
No precision_1 No precision_2
No recall_1 No recall_2